node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
YPO0416 | htrM | YPO0416 | YPO0058 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose. | 0.740 |
YPO0416 | irp1 | YPO0416 | YPO1910 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | Previously sequenced as Yersinia pestis yersiniabactin biosynthetic protein Irp1 TR:Q9Z373 (EMBL:AL031866) (3163 aa) fasta scores: E(): 0, 100.0% id in 3163 aa. Similar to Yersinia enterocolitica HMWP1 protein Irp1 TR:O54511 (EMBL:Y12527) (3161 aa) fasta scores: E(): 0, 97.9% id in 3163 aa. | 0.567 |
YPO0416 | kdtA | YPO0416 | YPO0055 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.971 |
YPO0416 | kdtX | YPO0416 | YPO0054 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SW:KDTX_SERMA (Q54435) (257 aa) fasta scores: E(): 0, 76.1% id in 259 aa and to Klebsiella pneumoniae lipopolysaccharide core biosynthesis glycosyl transferase WaaE SW:WAAE_KLEPN (Q9XC90) (258 aa) fasta scores: E(): 0, 70.6% id in 255 aa. | 0.580 |
YPO0416 | lpxK | YPO0416 | YPO1396 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.650 |
YPO0416 | rfaF | YPO0416 | YPO0057 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | Similar to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF, involved in LPS core biosynthesis, SW:RFAF_ECOLI (P37692) (348 aa) fasta scores: E(): 0, 73.8% id in 347 aa. | 0.978 |
arcB | arnA | YPO3555 | YPO2420 | Similar to Escherichia coli aerobic respiration control sensor protein ArcB SW:ARCB_ECOLI (P22763) (776 aa) fasta scores: E(): 0, 75.9% id in 781 aa, and to Vibrio cholerae sensor histidine kinase FexB or VC2369 TR:Q9KPJ8 (EMBL:AE004307) (785 aa) fasta scores: E(): 0, 58.8% id in 779 aa. | Probable formyl transferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | 0.523 |
arcB | arnT | YPO3555 | YPO2418 | Similar to Escherichia coli aerobic respiration control sensor protein ArcB SW:ARCB_ECOLI (P22763) (776 aa) fasta scores: E(): 0, 75.9% id in 781 aa, and to Vibrio cholerae sensor histidine kinase FexB or VC2369 TR:Q9KPJ8 (EMBL:AE004307) (785 aa) fasta scores: E(): 0, 58.8% id in 779 aa. | Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family. | 0.462 |
arcB | irp1 | YPO3555 | YPO1910 | Similar to Escherichia coli aerobic respiration control sensor protein ArcB SW:ARCB_ECOLI (P22763) (776 aa) fasta scores: E(): 0, 75.9% id in 781 aa, and to Vibrio cholerae sensor histidine kinase FexB or VC2369 TR:Q9KPJ8 (EMBL:AE004307) (785 aa) fasta scores: E(): 0, 58.8% id in 779 aa. | Previously sequenced as Yersinia pestis yersiniabactin biosynthetic protein Irp1 TR:Q9Z373 (EMBL:AL031866) (3163 aa) fasta scores: E(): 0, 100.0% id in 3163 aa. Similar to Yersinia enterocolitica HMWP1 protein Irp1 TR:O54511 (EMBL:Y12527) (3161 aa) fasta scores: E(): 0, 97.9% id in 3163 aa. | 0.956 |
arcB | kdtX | YPO3555 | YPO0054 | Similar to Escherichia coli aerobic respiration control sensor protein ArcB SW:ARCB_ECOLI (P22763) (776 aa) fasta scores: E(): 0, 75.9% id in 781 aa, and to Vibrio cholerae sensor histidine kinase FexB or VC2369 TR:Q9KPJ8 (EMBL:AE004307) (785 aa) fasta scores: E(): 0, 58.8% id in 779 aa. | Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SW:KDTX_SERMA (Q54435) (257 aa) fasta scores: E(): 0, 76.1% id in 259 aa and to Klebsiella pneumoniae lipopolysaccharide core biosynthesis glycosyl transferase WaaE SW:WAAE_KLEPN (Q9XC90) (258 aa) fasta scores: E(): 0, 70.6% id in 255 aa. | 0.546 |
arnA | arcB | YPO2420 | YPO3555 | Probable formyl transferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | Similar to Escherichia coli aerobic respiration control sensor protein ArcB SW:ARCB_ECOLI (P22763) (776 aa) fasta scores: E(): 0, 75.9% id in 781 aa, and to Vibrio cholerae sensor histidine kinase FexB or VC2369 TR:Q9KPJ8 (EMBL:AE004307) (785 aa) fasta scores: E(): 0, 58.8% id in 779 aa. | 0.523 |
arnA | arnT | YPO2420 | YPO2418 | Probable formyl transferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family. | 0.993 |
arnA | coaD | YPO2420 | YPO0053 | Probable formyl transferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.401 |
arnA | irp1 | YPO2420 | YPO1910 | Probable formyl transferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | Previously sequenced as Yersinia pestis yersiniabactin biosynthetic protein Irp1 TR:Q9Z373 (EMBL:AL031866) (3163 aa) fasta scores: E(): 0, 100.0% id in 3163 aa. Similar to Yersinia enterocolitica HMWP1 protein Irp1 TR:O54511 (EMBL:Y12527) (3161 aa) fasta scores: E(): 0, 97.9% id in 3163 aa. | 0.961 |
arnA | kdtX | YPO2420 | YPO0054 | Probable formyl transferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SW:KDTX_SERMA (Q54435) (257 aa) fasta scores: E(): 0, 76.1% id in 259 aa and to Klebsiella pneumoniae lipopolysaccharide core biosynthesis glycosyl transferase WaaE SW:WAAE_KLEPN (Q9XC90) (258 aa) fasta scores: E(): 0, 70.6% id in 255 aa. | 0.747 |
arnT | arcB | YPO2418 | YPO3555 | Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family. | Similar to Escherichia coli aerobic respiration control sensor protein ArcB SW:ARCB_ECOLI (P22763) (776 aa) fasta scores: E(): 0, 75.9% id in 781 aa, and to Vibrio cholerae sensor histidine kinase FexB or VC2369 TR:Q9KPJ8 (EMBL:AE004307) (785 aa) fasta scores: E(): 0, 58.8% id in 779 aa. | 0.462 |
arnT | arnA | YPO2418 | YPO2420 | Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family. | Probable formyl transferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the C-terminal section; belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily. | 0.993 |
arnT | irp1 | YPO2418 | YPO1910 | Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family. | Previously sequenced as Yersinia pestis yersiniabactin biosynthetic protein Irp1 TR:Q9Z373 (EMBL:AL031866) (3163 aa) fasta scores: E(): 0, 100.0% id in 3163 aa. Similar to Yersinia enterocolitica HMWP1 protein Irp1 TR:O54511 (EMBL:Y12527) (3161 aa) fasta scores: E(): 0, 97.9% id in 3163 aa. | 0.603 |
arnT | kdtA | YPO2418 | YPO0055 | Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.952 |
arnT | kdtX | YPO2418 | YPO0054 | Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family. | Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SW:KDTX_SERMA (Q54435) (257 aa) fasta scores: E(): 0, 76.1% id in 259 aa and to Klebsiella pneumoniae lipopolysaccharide core biosynthesis glycosyl transferase WaaE SW:WAAE_KLEPN (Q9XC90) (258 aa) fasta scores: E(): 0, 70.6% id in 255 aa. | 0.636 |