node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
YPO0416 | fdx-2 | YPO0416 | YPO2927 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | Similar to Chromatium vinosum 2[4Fe-4S] ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 5.8e-17, 60.5% id in 76 aa, and to Escherichia coli putative ferredoxin-like protein YfhL SW:YFHL_ECOLI (P52102) (86 aa) fasta scores: E(): 9.7e-30, 79.1% id in 86 aa. | 0.878 |
YPO0416 | htrM | YPO0416 | YPO0058 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose. | 0.740 |
YPO0416 | kdtA | YPO0416 | YPO0055 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.971 |
YPO0416 | nuoD | YPO0416 | YPO2553 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | NADH dehydrogenase I chain C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.952 |
YPO0416 | nuoH | YPO0416 | YPO2549 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | NADH dehydrogenase I chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.753 |
YPO0416 | nuoM | YPO0416 | YPO2544 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | NADH dehydrogenase I chain M; Similar to Escherichia coli SW:NUOM_ECOLI (P31978) (509 aa) fasta scores: E(): 0, 85.6% id in 513 aa, and to Pseudomonas aeruginosa NADH dehydrogenase I chain M NuoM TR:AAG06036 (EMBL:AE004693) (509 aa) fasta scores: E(): 0,74.9% id in 502 aa. | 0.756 |
YPO0416 | nuoN | YPO0416 | YPO2543 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | NADH dehydrogenase I chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.750 |
YPO0416 | rfa-2 | YPO0416 | YPO0056 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | Similar to Escherichia coli lipopolysaccharide core biosynthesis heptosyltransferase-1 RfaC SW:RFAC_ECOLI (P24173) (319 aa) fasta scores: E(): 0, 68.3% id in 319 aa. | 0.986 |
YPO0416 | rfaE | YPO0416 | YPO0654 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | ADP-heptose synthase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.853 |
YPO0416 | rfaF | YPO0416 | YPO0057 | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | Similar to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF, involved in LPS core biosynthesis, SW:RFAF_ECOLI (P37692) (348 aa) fasta scores: E(): 0, 73.8% id in 347 aa. | 0.978 |
fdx-2 | YPO0416 | YPO2927 | YPO0416 | Similar to Chromatium vinosum 2[4Fe-4S] ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 5.8e-17, 60.5% id in 76 aa, and to Escherichia coli putative ferredoxin-like protein YfhL SW:YFHL_ECOLI (P52102) (86 aa) fasta scores: E(): 9.7e-30, 79.1% id in 86 aa. | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | 0.878 |
fdx-2 | nuoD | YPO2927 | YPO2553 | Similar to Chromatium vinosum 2[4Fe-4S] ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 5.8e-17, 60.5% id in 76 aa, and to Escherichia coli putative ferredoxin-like protein YfhL SW:YFHL_ECOLI (P52102) (86 aa) fasta scores: E(): 9.7e-30, 79.1% id in 86 aa. | NADH dehydrogenase I chain C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.999 |
fdx-2 | nuoH | YPO2927 | YPO2549 | Similar to Chromatium vinosum 2[4Fe-4S] ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 5.8e-17, 60.5% id in 76 aa, and to Escherichia coli putative ferredoxin-like protein YfhL SW:YFHL_ECOLI (P52102) (86 aa) fasta scores: E(): 9.7e-30, 79.1% id in 86 aa. | NADH dehydrogenase I chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.985 |
fdx-2 | nuoM | YPO2927 | YPO2544 | Similar to Chromatium vinosum 2[4Fe-4S] ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 5.8e-17, 60.5% id in 76 aa, and to Escherichia coli putative ferredoxin-like protein YfhL SW:YFHL_ECOLI (P52102) (86 aa) fasta scores: E(): 9.7e-30, 79.1% id in 86 aa. | NADH dehydrogenase I chain M; Similar to Escherichia coli SW:NUOM_ECOLI (P31978) (509 aa) fasta scores: E(): 0, 85.6% id in 513 aa, and to Pseudomonas aeruginosa NADH dehydrogenase I chain M NuoM TR:AAG06036 (EMBL:AE004693) (509 aa) fasta scores: E(): 0,74.9% id in 502 aa. | 0.985 |
fdx-2 | nuoN | YPO2927 | YPO2543 | Similar to Chromatium vinosum 2[4Fe-4S] ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 5.8e-17, 60.5% id in 76 aa, and to Escherichia coli putative ferredoxin-like protein YfhL SW:YFHL_ECOLI (P52102) (86 aa) fasta scores: E(): 9.7e-30, 79.1% id in 86 aa. | NADH dehydrogenase I chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.984 |
fdx-2 | rfa-2 | YPO2927 | YPO0056 | Similar to Chromatium vinosum 2[4Fe-4S] ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 5.8e-17, 60.5% id in 76 aa, and to Escherichia coli putative ferredoxin-like protein YfhL SW:YFHL_ECOLI (P52102) (86 aa) fasta scores: E(): 9.7e-30, 79.1% id in 86 aa. | Similar to Escherichia coli lipopolysaccharide core biosynthesis heptosyltransferase-1 RfaC SW:RFAC_ECOLI (P24173) (319 aa) fasta scores: E(): 0, 68.3% id in 319 aa. | 0.877 |
fdx-2 | rfaF | YPO2927 | YPO0057 | Similar to Chromatium vinosum 2[4Fe-4S] ferredoxin Fdx SW:FER_CHRVI (P00208) (82 aa) fasta scores: E(): 5.8e-17, 60.5% id in 76 aa, and to Escherichia coli putative ferredoxin-like protein YfhL SW:YFHL_ECOLI (P52102) (86 aa) fasta scores: E(): 9.7e-30, 79.1% id in 86 aa. | Similar to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF, involved in LPS core biosynthesis, SW:RFAF_ECOLI (P37692) (348 aa) fasta scores: E(): 0, 73.8% id in 347 aa. | 0.696 |
htrM | YPO0416 | YPO0058 | YPO0416 | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose. | Similar to Escherichia coli lipopolysaccharide core biosynthesis protein RfaQ or WaaQ SW:RFAQ_ECOLI (P25742) (344 aa) fasta scores: E(): 2.3e-45, 40.356% id in 337 aa and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein RfaQ or WaaQ TR:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 3.8e-46, 41.246% id in 337 aa. | 0.740 |
htrM | rfa-2 | YPO0058 | YPO0056 | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose. | Similar to Escherichia coli lipopolysaccharide core biosynthesis heptosyltransferase-1 RfaC SW:RFAC_ECOLI (P24173) (319 aa) fasta scores: E(): 0, 68.3% id in 319 aa. | 0.932 |
htrM | rfaE | YPO0058 | YPO0654 | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose. | ADP-heptose synthase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the N-terminal section; belongs to the carbohydrate kinase PfkB family. | 0.996 |