STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
terESimilar to Serratia marcescens tellurium resistance protein TerE SW:TERE_SERMA (Q52358) (191 aa) fasta scores: E(): 0, 84.3% id in 191 aa and to Escherichia coli O157:H7 putative tellurium resistance protein C, TlrC TR:Q9LAN8 (EMBL:AF126104) (192 aa) fasta scores: E(): 0, 64.7% id in 190 aa. (191 aa)    
Predicted Functional Partners:
terB
Similar to Serratia marcescens tellurite resistance protein TerB TR:Q52355 (EMBL:U59239) (151 aa) fasta scores: E(): 0, 71.5% id in 151 aa.
  
 0.947
terC
Similar to Serratia marcescens tellurium resistance protein TerC SW:TERC_SERMA (Q52356) (346 aa) fasta scores: E(): 0, 83.3% id in 342 aa, and to Escherichia coli O157:H7 putative tellurium resistance protein D TR:Q9LAN7 (EMBL:AF126104) (89 aa) fasta scores: E(): 5.4e-21, 82.3% id in 79 aa.
 
  
 0.903
YPO0292
Similar to Deinococcus radiodurans conserved hypothetical protein DR2214 TR:Q9RSB1 (EMBL:AE002054) (371 aa) fasta scores: E(): 0, 40.7% id in 369 aa. The N-terminus of this protein is similar to Serratia marcescens plasmid hypothetical protein TR:P95796 (EMBL:U59239) (197 aa) fasta scores: E(): 0, 70.4% id in 189 aa, and to.
 
    0.829
YPO0289
Putative ATP/GTP-binding protein; Similar to several proteins of undefined function including: Deinococcus radiodurans hypothetical protein DR2219 TR:Q9RSA7 (EMBL:AE002054) (310 aa) fasta scores: E(): 0, 40.5% id in 309 aa and Streptomyces coelicolor putative ATP/GTP-binding protein SCC8A.21c TR:Q9KY27 (EMBL:AL356892) (388 aa) fasta scores: E(): 5.7e-14, 32.6% id in 344 aa.
 
    0.828
YPO0290
Similar to Deinococcus radiodurans hypothetical protein DR2218 TR:Q9RSA8 (EMBL:AE002054) (353 aa) fasta scores: E(): 6.2e-23, 35.2% id in 338 aa.
 
     0.828
YPO0291
Similar to Deinococcus radiodurans hypothetical protein DR2215 TR:Q9RSB0 (EMBL:AE002054) (260 aa) fasta scores: E(): 3.3e-21, 36.1% id in 255 aa. Also similar to the C-terminus of Serratia marcescens plasmid hypothetical protein TR:P95795 (EMBL:U59239) (238 aa) fasta scores: E(): 3.3e-29, 87.1% id in 93 aa.
 
     0.786
terA
Similar to Serratia marcescens tellurite resistance protein TerA TR:Q52354 (EMBL:U59239) (341 aa) fasta scores: E(): 0, 70.0% id in 350 aa.
 
  
0.754
YPO0293
Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 41.6 kDa protein SC5A7.21c TR:O88027 (EMBL:AL031107) (388 aa) fasta scores: E(): 1.1e-14, 27.4% id in 328 aa. In addition the C-terminus of the product of this CDS is similar to Serratia marcescens plasmid hypothetical protein TR:P95797 (EMBL:U59239) (173 aa) fasta scores: E(): 0, 56.1% id in 171 aa.
 
    0.726
terY
Putative tellurium resistance protein; Similar to Serratia marcescens plasmid (R478) encoded, possible tellurium resistance protein TerY TR:P75011 (EMBL:U49054) (197 aa) fasta scores: E(): 0,85.3% id in 197 aa, and to Escherichia coli hypothetical protein TR:P76396 (EMBL:AE000297) (219 aa) fasta scores: E(): 9.9e-12, 29.8% id in 181 aa.
 
   
 0.695
YPO0592
Putative kinase protein; Internal region of the CDS similar to internal regions of Streptomyces coelicolor protein serine/threonine kinase PkaD TR:Q9L0I0 (EMBL:AL161755) (599 aa) fasta scores: E(): 0.00027, 29.4% id in 211 aa, and to Dictyostelium discoideum RAC-family serine/threonine kinase homologue DagA SW:KRAC_DICDI (P54644) (444 aa) fasta scores: E(): 0.0082, 23.8% id in 323 aa.
 
     0.536
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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