STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPO0318Putative exported protein; Similar to Escherichia coli hypothetical protein YjbO SW:YJBO_ECOLI (P32696) (80 aa) fasta scores: E(): 1.7e-14, 58.3% id in 72 aa. (72 aa)    
Predicted Functional Partners:
YPO1401
Conserved hypothetical protein; C-terminal region is similar to the C-terminus of Homo sapiens fructosamine-3-kinase FN3K TR:CAC16393 (EMBL:AJ404615) (309 aa) fasta scores: E(): 0.038, 22.0% id in 205 aa. Full length CDS is similar to Escherichia coli hypothetical protein YcbJ TR:P75845 (EMBL:AE000194) (297 aa) fasta scores: E(): 0, 54.5% id in 297 aa.
  
     0.771
YPO3137
Similar to Escherichia coli hypothetical protein YbaJ SW:YBAJ_ECOLI (P37611) (124 aa) fasta scores: E(): 1.4e-29, 65.8% id in 111 aa.
  
     0.770
tsgA
Conserved integral membrane protein; Similar to Escherichia coli hypothetical 43.2 kDa protein in ppiA-nirB intergenic region YhfC SW:YHFC_ECOLI (P21229) (393 aa) fasta scores: E(): 0, 74.8% id in 393 aa.
  
    0.768
mzrA
Putative membrane protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
    0.768
YPO2199
Putative sulfate transporter (pseudogene); Pfam match to entry PF01740 STAS, STAS domain, score 42.50, E-value 9.5e-09.
  
    0.765
ycfL
Putative lipoprotein; Similar to Escherichia coli hypothetical 14.0 kDa protein in fhuE-ndh intergenic region YcfL SW:YCFL_ECOLI (P75946) (125 aa) fasta scores: E(): 1.5e-14, 45.5% id in 110 aa, and to Vibrio cholerae hypothetical protein Vc1895 TR:Q9KQV3 (EMBL:AE004265) (129 aa) fasta scores: E(): 0.0016, 30.3% id in 122 aa.
  
     0.761
aaeX
Putative membrane protein; Similar to Escherichia coli hypothetical 10.3 kDa protein in argR-cafA intergenic region YhcR SW:YHCR_ECOLI (P46478) (90 aa) fasta scores: E(): 1.4e-24, 81.8% id in 66 aa, and to Escherichia coli hypothetical 8.9 kDa protein in slyA-sodC intergenic region YdhI SW:YDHI_ECOLI (P76184) (78 aa) fasta scores: E(): 0.017, 34.4% id in 61 aa.
  
    0.756
uspB
Similar to Escherichia coli universal stress protein B UspB SW:USPB_ECOLI (P37632) (111 aa) fasta scores: E(): 0, 87.4% id in 111 aa, and to Vibrio cholerae hypothetical protein VC0079 TR:Q9KVR0 (EMBL:AE004099) (107 aa) fasta scores: E(): 2.9e-18, 47.7% id in 109 aa.
  
     0.753
YPO0377
Putative membrane protein; Similar to several proteins of unknown function including: Escherichia coli hypothetical 7.2 kDa protein in hflC-purA intergenic region YjeT SW:YJET_ECOLI (P39289) (65 aa) fasta scores: E(): 3.7e-20, 81.538% id in 65 aa and Escherichia coli O157:H7 hypothetical 7.2 kDa protein ecs5152 TR:BAB38575 (EMBL:AP002568) (65 aa) fasta scores: E(): 3.7e-20, 81.538% id in 65 aa.
  
     0.746
ampE
Putative membrane-bound sensory transducer in beta-lactamase regulation; Similar to Escherichia coli AmpE protein SW:AMPE_ECOLI (P13017) (284 aa) fasta scores: E(): 0, 64.4% id in 284 aa, and to Salmonella typhimurium AmpE protein TR:Q9L4I3 (EMBL:AJ242516) (284 aa) fasta scores: E(): 0,63.0% id in 284 aa.
  
     0.742
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.