STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPO0502Similar to Pseudomonas aeruginosa hypothetical protein PA0085 TR:AAG03475 (EMBL:AE004447) (162 aa) fasta scores: E(): 1.5e-15, 38.9% id in 167 aa. (172 aa)    
Predicted Functional Partners:
YPO0500
Similar to Pseudomonas aeruginosa hypothetical protein PA0083 TR:AAG03473 (EMBL:AE004447) (172 aa) fasta scores: E(): 0, 59.9% id in 162 aa, and to Edwardsiella ictaluri putative protein EIP20 TR:O52407 (EMBL:AF037441) (170 aa) fasta scores: E(): 2.1e-20, 41.1% id in 163 aa. Similar to YPO2939 (59.3% identity in 162 aa overlap).
 
 0.994
YPO0501
Similar to Pseudomonas aeruginosa hypothetical protein PA0084 TR:AAG03474 (EMBL:AE004447) (498 aa) fasta scores: E(): 0, 63.9% id in 479 aa, and to Edwardsiella ictaluri hypothetical protein EIP55 TR:O52406 (EMBL:AF037441) (495 aa) fasta scores: E(): 0, 46.6% id in 494 aa. Similar to YPO2938 (61.4% identity in 479 aa overlap).
 
 0.994
YPO0499
Hypothetical protein; Weakly similar to Pseudomonas aeruginosa hypothetical protein PA0082 TR:AAG03472 (EMBL:AE004447) (344 aa) fasta scores: E(): 0.00022, 22.9% id in 341 aa.
 
 
 0.992
YPO0505
Similar to Pseudomonas aeruginosa hypothetical protein PA0089 TR:AAG03479 (EMBL:AE004447) (348 aa) fasta scores: E(): 1.2e-22, 28.8% id in 316 aa, and to Pseudomonas aeruginosa hypothetical protein PA2370 TR:AAG05758 (EMBL:AE004663) (338 aa) fasta scores: E(): 3.1e-11, 27.6% id in 301 aa.
 
 
  0.983
YPO0503
Similar to Edwardsiella ictaluri hypothetical protein eip19 TR:O52404 (EMBL:AF037441) (158 aa) fasta scores: E(): 9.1e-07, 33.6% id in 128 aa, and to Pseudomonas aeruginosa hypothetical protein PA0087 TR:AAG03477 (EMBL:AE004447) (169 aa) fasta scores: E(): 0.0041, 29.9% id in 127 aa.
 
    0.978
YPO0507
Similar to Pseudomonas aeruginosa hypothetical protein PA0095 TR:AAG03485 (EMBL:AE004448) (741 aa) fasta scores: E(): 0, 31.5% id in 728 aa, and to Pseudomonas aeruginosa hypothetical protein PA0091 TR:AAG03481 (EMBL:AE004447) (643 aa) fasta scores: E(): 0, 32.7% id in 646 aa.
 
  
 0.978
YPO0504
Similar to Pseudomonas aeruginosa hypothetical protein PA0088 TR:AAG03478 (EMBL:AE004447) (619 aa) fasta scores: E(): 0, 29.0% id in 617 aa.
 
    0.964
clpB
Putative Clp ATPase; Similar to Escherichia coli ClpB protein, which is thought to form part of a multi-chaperone system supressing protein aggregation, SW:CLPB_ECOLI (P03815) (857 aa) fasta scores: E(): 0, 35.1% identity in 883 aa overlap. Also similar to Yersinia enterocolitica Clp protease-associated protein ClpB TR:AAG00524 (EMBL:AF285784) (890 aa) fasta scores: E(): 0, 44.2% id in 866 aa. Contains small internal deletions relative to orthologues; Belongs to the ClpA/ClpB family.
 
 
 0.957
YPO2939
Similar to Pseudomonas aeruginosa hypothetical protein PA0083 TR:AAG03473 (EMBL:AE004447) (172 aa) fasta scores: E(): 0, 73.6% id in 174 aa, and to Edwardsiella ictaluri hypothetical protein Eip20 TR:O52407 (EMBL:AF037441) (170 aa) fasta scores: E(): 5e-21, 42.5% id in 160 aa. Similar to YPO0500 (59.3% identity in 162 aa overlap).
 
 0.923
YPO0508
Hypothetical protein; No significant database hits.
  
    0.921
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.