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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPO0809Similar to Erwinia carotovora general secretion pathway protein K OutK SW:GSPK_ERWCA (P31706) (328 aa) fasta scores: E(): 0.00012, 22.6% id in 327 aa, and to Klebsiella pneumoniae general secretion pathway protein K PulK SW:GSPK_KLEPN (P15750) (326 aa) fasta scores: E(): 0.0012, 25.4% id in 323 aa. (318 aa)    
Predicted Functional Partners:
YPO0810
Similar to Aeromonas hydrophila general secretion pathway protein J ExeJ SW:GSPJ_AERHY (P31739) (207 aa) fasta scores: E(): 1.1e-14, 30.3% id in 198 aa, and to enterohemorrhagic Escherichia coli (EHEC) O157:H7 large virulence plasmid (pO157) protein EtpJ TR:O32572 (EMBL:Y09824) (199 aa) fasta scores: E(): 2.1e-16, 31.9% id in 191 aa.
 
 
 0.997
YPO0811
Similar to Aeromonas hydrophila general secretion pathway protein I ExeI SW:GSPI_AERHY (P31737) (119 aa) fasta scores: E(): 4.3e-15, 41.2% id in 102 aa, and to Erwinia chrysanthemi general secretion pathway protein I precursor OutI SW:GSPI_ERWCH (P24688) (125 aa) fasta scores: E(): 8.1e-13, 34.9% id in 109 aa.
 
 
 0.993
YPO0813
Similar to Erwinia carotovora general secretion pathway protein G OutG SW:GSPG_ERWCA (P31586) (156 aa) fasta scores: E(): 0, 69.9% id in 133 aa, and to Erwinia chrysanthemi general secretion pathway protein G OutG SW:GSPG_ERWCH (P31585) (153 aa) fasta scores: E(): 0, 67.9% id in 134 aa.
 
 
 0.967
YPO0812
Similar to Erwinia chrysanthemi general secretion pathway protein H OutH SW:GSPH_ERWCH (P24687) (181 aa) fasta scores: E(): 0.13, 20.2% id in 178 aa, and to enterohemorrhagic Escherichia coli (EHEC) O157:H7 large virulence plasmid (pO157) protein EtpH TR:O32570 (EMBL:Y09824) (184 aa) fasta scores: E(): 0.084, 20.8% id in 183 aa.
  
 
 0.948
YPO1015
Similar to Escherichia coli prepilin peptidase dependent protein B SW:PPDB_ECOLI (P08371) (187 aa) fasta scores: E(): 5e-17, 30.4% id in 191 aa, and N-terminus of Pseudomonas aeruginosa general secretion pathway protein J precursor SW:GSPJ_PSEAE (Q00517) (237 aa) fasta scores: E(): 0.19, 39.3% id in 61 aa.
  
 
 0.931
YPO0808
Similar to Aeromonas hydrophila general secretion pathway protein L ExeL SW:GSPL_AERHY (P45789) (389 aa) fasta scores: E(): 1.8e-20, 23.3% id in 347 aa, and to Erwinia chrysanthemi general secretion pathway protein L OutL SW:GSPL_ERWCH (P31707) (399 aa) fasta scores: E(): 1.2e-16, 20.5% id in 396 aa.
 
  
 0.894
YPO1014a
Prepilin peptidase (partial); Similar to the C-terminal regions of Escherichia coli prepilin peptidase dependent protein A PpdA SW:PPDA_ECOLI (P33554) (156 aa) fasta scores: E(): 0.00089,41.304% id in 46 aa, and Escherichia coli O157:H7 prepilin peptidase dependent protein A ECS3683 TR:BAB37106 (EMBL:AP002563) (156 aa) fasta scores: E(): 0.00089,41.304% id in 46 aa. Probable gene remnant resulting from insertion of the upstream IS element and recombination; was marked partial.
  
 
 0.831
YPO0806
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.810
YPO0807
Putative membrane protein; Poor database matches. Similar to Amsacta moorei entomopoxvirus protein AMV030 TR:AAG02736 (EMBL:AF250284) (144 aa) fasta scores: E(): 5.4, 22.9% id in 118 aa, and similar to the N-terminual region of Amsacta moorei entomopoxvirus protein AMV212 TR:AAG02918 (EMBL:AF250284) (284 aa) fasta scores: E(): 10, 29.1% id in 127 aa.
  
    0.776
YPO0816
Similar to Klebsiella pneumoniae general secretion pathway protein D GspD SW:GSPD_KLEPN (P15644) (660 aa) fasta scores: E(): 0, 48.9% id in 640 aa, and to Aeromonas salmonicida general secretion pathway protein D ExeD SW:GSPD_AERSA (P45778) (678 aa) fasta scores: E(): 0, 47.1% id in 633 aa. The CDS contains an internal deletion relative to other orthologues around codon 380. The effect on function is unknown.
 
  
 0.586
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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