Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YPO1986Putative exported protein; Similar to the internal region of Bacillus halodurans spore coat polysaccharide synthesis SpsK TR:Q9K7J6 (EMBL:AP001518) (283 aa) fasta scores: E(): 9.2,24.2% id in 124 aa. (154 aa)    
Predicted Functional Partners:
YPO1987
Hypothetical protein; No significant database hits.
     
 0.786
YPO2487
Putative membrane protein; No significant database matches.
      
 0.618
YPO2489
Similar to Neisseria meningitidis hypothetical protein NMA0037 TR:Q9JQT0 (EMBL:AL162752) (157 aa) fasta scores: E(): 1.8e-19, 36.538% id in 156 aa.
      
 0.618
YPO3046
Putative sulfatase modifier protein; Similar to Bacteroides thetaiotaomicron chondro-6-sulfatase regulatory protein ChuR SW:CHUR_BACTN (Q02550) (401 aa) fasta scores: E(): 0, 41.7% id in 386 aa,and to Escherichia coli hypothetical protein YdeM SW:YDEM_ECOLI (P76134) (385 aa) fasta scores: E(): 0, 65.8% id in 383 aa, and to Klebsiella pneumoniae iron-sulfur modifier protein AtsB TR:Q9L4Y5 (EMBL:AF262989) (395 aa) fasta scores: E(): 1.1e-28, 34.5% id in 365 aa.
      
 0.618
YPO2096
Hypothetical phage protein; No significant database matches.
      
 0.597
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.