STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPO2152Similar to Escherichia coli hypothetical protein YeaH SW:YEAH_ECOLI (P76235) (427 aa) fasta scores: E(): 0,86.7% id in 421 aa, and to Vibrio cholerae hypothetical protein VC1873 vc1873 TR:Q9KQX4 (EMBL:AE004263) (423 aa) fasta scores: E(): 0, 72.7% id in 421 aa; Belongs to the UPF0229 family. (424 aa)    
Predicted Functional Partners:
YPO2153
Similar to Escherichia coli hypothetical protein YeaG SW:YEAG_ECOLI (P77391) (644 aa) fasta scores: E(): 0,94.4% id in 644 aa, and to Vibrio cholerae hypothetical protein VC1872 vc1872 TR:Q9KQX5 (EMBL:AE004263) (644 aa) fasta scores: E(): 0, 84.0% id in 644 aa.
 
  
 0.988
YPO2145
Similar to Escherichia coli hypothetical protein YcgB SW:YCGB_ECOLI (P29013) (510 aa) fasta scores: E(): 0,84.6% id in 508 aa, and to Vibrio cholerae hypothetical protein VC1874 vc1874 TR:Q9KQX3 (EMBL:AE004263) (516 aa) fasta scores: E(): 0, 73.5% id in 501 aa.
 
  
 0.978
napD
Conserved hypothetical protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
   
    0.607
yegP
Similar to Escherichia coli hypothetical protein YegP SW:YEGP_ECOLI (P76402) (110 aa) fasta scores: E(): 3.4e-19, 53.7% id in 108 aa, and to Pseudomonas aeruginosa hypothetical protein PA0329 TR:AAG03718 (EMBL:AE004471) (110 aa) fasta scores: E(): 6.7e-15, 49.5% id in 95 aa; Belongs to the UPF0339 family. Duplicated subfamily.
   
    0.547
YPO2151
Putative membrane protein; Similar to Ralstonia metallidurans putative nickel transport protein CnrT TR:Q9L3G0 (EMBL:AJ276513) (351 aa) fasta scores: E(): 0, 55.1% id in 352 aa, and to Methanobacterium thermoautotrophicum hypothetical protein MTH841 SW:Y841_METTH (O26929) (343 aa) fasta scores: E(): 8.2e-14, 30.3% id in 294 aa.
  
    0.526
YPO0569a
Similar to Escherichia coli hypothetical protein YqjE SW:YQJE_ECOLI (P42618) (134 aa) fasta scores: E(): 6.7e-29, 62.3% id in 130 aa, and to Sesamum indicum hypothetical oleosin protein TR:O04925 (EMBL:U97700) (144 aa) fasta scores: E(): 6.7, 29.4% id in 136 aa.
   
    0.518
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.