| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| YPO0286 | ompW | YPO0286 | YPO2201 | Similar to many coproporphyrinogen III oxidases including: Vibrio cholerae oxygen-independent coproporphyrinogen III oxidase VCA0909 TR:Q9KL39 (EMBL:AE004418) (455 aa) fasta scores: E(): 0, 37.9% id in 428 aa and to Escherichia coli oxygen-independent coproporphyrinogen III oxidase HemN SW:HEMN_ECOLI (P32131) (457 aa) fasta scores: E(): 4.7e-19, 26.9% id in 420 aa. | Putative exported protein; Similar to Escherichia coli outer membrane protein W precursor OmpW SW:OMPW_ECOLI (P21364) (212 aa) fasta scores: E(): 0, 58.5% id in 212 aa, and to Salmonella typhimurium outer membrane protein YciD TR:Q9KWV2 (EMBL:Y19180) (185 aa) fasta scores: E(): 0, 58.5% id in 183 aa. | 0.826 |
| YPO0286 | yhjA | YPO0286 | YPO3342 | Similar to many coproporphyrinogen III oxidases including: Vibrio cholerae oxygen-independent coproporphyrinogen III oxidase VCA0909 TR:Q9KL39 (EMBL:AE004418) (455 aa) fasta scores: E(): 0, 37.9% id in 428 aa and to Escherichia coli oxygen-independent coproporphyrinogen III oxidase HemN SW:HEMN_ECOLI (P32131) (457 aa) fasta scores: E(): 4.7e-19, 26.9% id in 420 aa. | Putative exogenous ferric siderophore receptor (pseudogene); PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2. | 0.586 |
| b0054 | bamA | YPO0495 | YPO1052 | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | 0.937 |
| b0054 | con | YPO0495 | YPO1435 | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Putative outer membrane porin A protein; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | 0.735 |
| b0054 | dapX | YPO0495 | YPO3061 | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.785 |
| b0054 | omp4 | YPO0495 | YPO2506 | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Similar to Serratia marcescens outer membrane protein Omp4 TR:Q54470 (EMBL:Z37157) (172 aa) fasta scores: E(): 0, 74.1% id in 174 aa, and to Escherichia coli outer membrane protein OmpX SW:OMPX_ECOLI (P36546) (171 aa) fasta scores: E(): 0, 70.7% id in 174 aa. | 0.537 |
| b0054 | ompC | YPO0495 | YPO1222 | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Similar to Escherichia coli outer membrane protein C precursor OmpC or MeoA or Par SW:OMPC_ECOLI (P06996) (367 aa) fasta scores: E(): 0, 70.3% id in 381 aa, and to Serratia marcescens outer membrane protein C precursor OmpC SW:OMPC_SERMA (Q54471) (376 aa) fasta scores: E(): 0, 68.1% id in 382 aa; Belongs to the Gram-negative porin family. | 0.769 |
| b0054 | ompF | YPO0495 | YPO1411 | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Similar to Klebsiella pneumoniae outer membrane protein C OmpC SW:OMPC_KLEPN (Q48473) (363 aa) fasta scores: E(): 0, 62.2% id in 370 aa, to Escherichia coli outer membrane pore protein E OmpE SW:PHOE_ECOLI (P02932) (351 aa) fasta scores: E(): 0, 58.3% id in 362 aa and to Yersinia pestis YPO1205 (371 aa) fasta scores: E(): 0,62.2% identity in 376 aa overlap; Belongs to the Gram-negative porin family. | 0.751 |
| b0054 | ompW | YPO0495 | YPO2201 | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Putative exported protein; Similar to Escherichia coli outer membrane protein W precursor OmpW SW:OMPW_ECOLI (P21364) (212 aa) fasta scores: E(): 0, 58.5% id in 212 aa, and to Salmonella typhimurium outer membrane protein YciD TR:Q9KWV2 (EMBL:Y19180) (185 aa) fasta scores: E(): 0, 58.5% id in 183 aa. | 0.611 |
| bamA | b0054 | YPO1052 | YPO0495 | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.937 |
| bamA | con | YPO1052 | YPO1435 | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | Putative outer membrane porin A protein; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | 0.927 |
| bamA | dapX | YPO1052 | YPO3061 | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | Lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.983 |
| bamA | omp4 | YPO1052 | YPO2506 | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | Similar to Serratia marcescens outer membrane protein Omp4 TR:Q54470 (EMBL:Z37157) (172 aa) fasta scores: E(): 0, 74.1% id in 174 aa, and to Escherichia coli outer membrane protein OmpX SW:OMPX_ECOLI (P36546) (171 aa) fasta scores: E(): 0, 70.7% id in 174 aa. | 0.864 |
| bamA | ompC | YPO1052 | YPO1222 | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | Similar to Escherichia coli outer membrane protein C precursor OmpC or MeoA or Par SW:OMPC_ECOLI (P06996) (367 aa) fasta scores: E(): 0, 70.3% id in 381 aa, and to Serratia marcescens outer membrane protein C precursor OmpC SW:OMPC_SERMA (Q54471) (376 aa) fasta scores: E(): 0, 68.1% id in 382 aa; Belongs to the Gram-negative porin family. | 0.825 |
| bamA | ompF | YPO1052 | YPO1411 | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | Similar to Klebsiella pneumoniae outer membrane protein C OmpC SW:OMPC_KLEPN (Q48473) (363 aa) fasta scores: E(): 0, 62.2% id in 370 aa, to Escherichia coli outer membrane pore protein E OmpE SW:PHOE_ECOLI (P02932) (351 aa) fasta scores: E(): 0, 58.3% id in 362 aa and to Yersinia pestis YPO1205 (371 aa) fasta scores: E(): 0,62.2% identity in 376 aa overlap; Belongs to the Gram-negative porin family. | 0.845 |
| bamA | ompW | YPO1052 | YPO2201 | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | Putative exported protein; Similar to Escherichia coli outer membrane protein W precursor OmpW SW:OMPW_ECOLI (P21364) (212 aa) fasta scores: E(): 0, 58.5% id in 212 aa, and to Salmonella typhimurium outer membrane protein YciD TR:Q9KWV2 (EMBL:Y19180) (185 aa) fasta scores: E(): 0, 58.5% id in 183 aa. | 0.631 |
| con | b0054 | YPO1435 | YPO0495 | Putative outer membrane porin A protein; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.735 |
| con | bamA | YPO1435 | YPO1052 | Putative outer membrane porin A protein; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Putative surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. | 0.927 |
| con | dapX | YPO1435 | YPO3061 | Putative outer membrane porin A protein; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.758 |
| con | omp4 | YPO1435 | YPO2506 | Putative outer membrane porin A protein; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. | Similar to Serratia marcescens outer membrane protein Omp4 TR:Q54470 (EMBL:Z37157) (172 aa) fasta scores: E(): 0, 74.1% id in 174 aa, and to Escherichia coli outer membrane protein OmpX SW:OMPX_ECOLI (P36546) (171 aa) fasta scores: E(): 0, 70.7% id in 174 aa. | 0.871 |
