STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPO2467Similar to Pasteurella multocida hypothetical protein PM0312 TR:Q9CNW1 (EMBL:AE006067) (1106 aa) fasta scores: E(): 4.8e-143, 40.941% id in 1126 aa. (1095 aa)    
Predicted Functional Partners:
YPO2468
Similar to Pasteurella multocida hypothetical protein PM0311 TR:Q9CNW2 (EMBL:AE006067) (326 aa) fasta scores: E(): 6.5e-74, 58.413% id in 315 aa.
 
  
 0.984
YPO2464
Similar to Pasteurella multocida hypothetical protein PM0306 TR:Q9CNW7 (EMBL:AE006066) (327 aa) fasta scores: E(): 4.2e-07, 34.049% id in 326 aa.
 
   
 0.906
YPO2465
Similar to Pasteurella multocida hypothetical protein PM0305 TR:Q9CNW8 (EMBL:AE006066) (444 aa) fasta scores: E(): 1.6e-25, 28.918% id in 453 aa.
 
   
 0.906
YPO2462
Similar to Pasteurella multocida hypothetical protein PM0308 TR:Q9CNW5 (EMBL:AE006066) (186 aa) fasta scores: E(): 5.8e-13, 32.620% id in 187 aa.
 
   
 0.903
YPO2463
Similar to Pasteurella multocida hypothetical protein PM0307 TR:Q9CNW6 (EMBL:AE006066) (335 aa) fasta scores: E(): 1.9e-67, 55.522% id in 335 aa.
 
  
 0.903
YPO2108
Similar to the N-terminal region of bacteriophage MB78 60 kDa protein gp62 TR:Q9T0Q3 (EMBL:Y19202) (540 aa) fasta scores: E(): 1.5e-19, 30.689% id in 479 aa. CDS contains a nonsence mutation (ochre) after codon 242.
      
 0.613
YPO2116
Putative phage protein; C-terminal region of the CDS is similar to the C-terminus of bacteriophage N15 protein gp13 TR:O64327 (EMBL:AF064539) (245 aa) fasta scores: E(): 1.6e-07, 50.0% id in 92 aa, and to Yersinia pestis hypothetical protein YPMT1.14C TR:O68731 (EMBL:AF053947) (248 aa) fasta scores: E(): 4.7e-06, 30.2% id in 192 aa.
      
 0.613
YPO2466
Hypothetical protein; Poor database matches. Weakly similar to an internal region of Chlamydia muridarum ATP-dependent helicase PcrA tc0898 TR:Q9PJD1 (EMBL:AE002356) (634 aa) fasta scores: E(): 5, 25.301% id in 83 aa.
  
    0.520
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.