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second shell of interactors
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a 3D structure is known or predicted
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YPO3689Putative succinate-semialdehyde dehydrogenase (pseudogene); PS00070 Aldehyde dehydrogenases cysteine active site. (152 aa)    
Predicted Functional Partners:
YPO3690
Putative ribonuclease inhibitor; Similar to Bacillus amyloliquefaciens Barstar SW:BARS_BACAM (P11540) (89 aa) fasta scores: E(): 0.00075,33.3% id in 60 aa, and to Escherichia coli hypothetical protein YhcO SW:YHCO_ECOLI (P46480) (90 aa) fasta scores: E(): 9.4e-16, 53.0% id in 83 aa.
 
 
 0.990
YPO4086
Putative lipoprotein; Similar to Escherichia coli hypothetical protein Yidq or b3688 SW:YIDQ_ECOLI (P31454) (135 aa) fasta scores: E(): 8.5e-15, 43.3% id in 104 aa. CDS is truncated at the N-terminus in comparison to the E. coli protein.
  
     0.505
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
     
  0.500
cca
tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.
     
  0.500
ams
Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
     
  0.500
rnb
Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction.
     
  0.500
rnt
Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.
     
  0.500
rnpA
Ribonuclease P protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
     
  0.500
YPO0146
Hypothetical protein; Weakly similar to Escherichia coli hypothetical protein YrfD SW:YRFD_ECOLI (P45753) (259 aa) fasta scores: E(): 9.6e-09, 25.1% id in 291 aa.
  
     0.421
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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