STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG19430.1Metal-sulfur cluster biosynthetic enzyme. (111 aa)    
Predicted Functional Partners:
OJG19072.1
ABC transporter ATP-binding protein.
 
  
 0.800
OJG19073.1
FeS assembly protein SufD.
 
   
 0.750
OJG19074.1
SufS family cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.716
OJG19075.1
NifU family SUF system FeS assembly protein.
  
    0.709
OJG19076.1
Hypothetical protein.
 
   
 0.702
OJG19323.1
Crotonase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.679
OJG19432.1
YitT family protein.
       0.638
OJG19808.1
MaoC family protein.
  
  
 0.627
OJG19313.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.602
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.582
Your Current Organism:
Enterococcus canis
NCBI taxonomy Id: 214095
Other names: CCUG 46666, E. canis, Enterococcus canis De Gradf et al. 2003, LMG 12316, LMG:12316, NBRC 100695
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