STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG18975.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
OJG18974.1
Hypothetical protein.
       0.884
OJG18973.1
Hypothetical protein.
       0.853
OJG18607.1
Hypothetical protein.
  
    0.835
rpoE
DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
    0.834
OJG18972.1
Hypothetical protein.
       0.806
OJG18969.1
HD protein.
     
 0.771
OJG18970.1
Lipoate-protein ligase A.
     
 0.752
OJG19226.1
Hypothetical protein.
  
     0.653
OJG18516.1
Hypothetical protein.
  
     0.651
OJG18517.1
Hypothetical protein.
  
     0.637
Your Current Organism:
Enterococcus canis
NCBI taxonomy Id: 214095
Other names: CCUG 46666, E. canis, Enterococcus canis De Gradf et al. 2003, LMG 12316, LMG:12316, NBRC 100695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.