STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG18984.1ABC transporter permease. (304 aa)    
Predicted Functional Partners:
OJG18983.1
ABC transporter permease.
 
 0.996
OJG18985.1
Hypothetical protein.
 
 0.995
OJG18467.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.983
OJG18469.1
Sugar ABC transporter, substrate-binding component.
 
 0.965
OJG18598.1
Multiple sugar-binding transport ATP-binding protein MsmK; Belongs to the ABC transporter superfamily.
 
 0.948
OJG20255.1
Hypothetical protein.
 
 0.928
OJG18866.1
Hypothetical protein.
 
 0.928
OJG18697.1
Transport system permease.
 
 0.923
OJG18318.1
Hypothetical protein.
 0.922
OJG19456.1
Permease component of ABC-type sugar transporter.
 
 0.921
Your Current Organism:
Enterococcus canis
NCBI taxonomy Id: 214095
Other names: CCUG 46666, E. canis, Enterococcus canis De Gradf et al. 2003, LMG 12316, LMG:12316, NBRC 100695
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.