Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG17593.1 | OJG17594.1 | RU97_GL002601 | RU97_GL002602 | PTS system lactose/cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Membrane protein. | 0.788 |
OJG17593.1 | OJG17595.1 | RU97_GL002601 | RU97_GL002603 | PTS system lactose/cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | beta-N-acetylhexosaminidase. | 0.690 |
OJG17593.1 | OJG17596.1 | RU97_GL002601 | RU97_GL002604 | PTS system lactose/cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Hypothetical protein. | 0.690 |
OJG17593.1 | murQ | RU97_GL002601 | RU97_GL002600 | PTS system lactose/cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.498 |
OJG17594.1 | OJG17593.1 | RU97_GL002602 | RU97_GL002601 | Membrane protein. | PTS system lactose/cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.788 |
OJG17594.1 | OJG17595.1 | RU97_GL002602 | RU97_GL002603 | Membrane protein. | beta-N-acetylhexosaminidase. | 0.756 |
OJG17594.1 | OJG17596.1 | RU97_GL002602 | RU97_GL002604 | Membrane protein. | Hypothetical protein. | 0.755 |
OJG17594.1 | murQ | RU97_GL002602 | RU97_GL002600 | Membrane protein. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.938 |
OJG17595.1 | OJG17593.1 | RU97_GL002603 | RU97_GL002601 | beta-N-acetylhexosaminidase. | PTS system lactose/cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.690 |
OJG17595.1 | OJG17594.1 | RU97_GL002603 | RU97_GL002602 | beta-N-acetylhexosaminidase. | Membrane protein. | 0.756 |
OJG17595.1 | OJG17596.1 | RU97_GL002603 | RU97_GL002604 | beta-N-acetylhexosaminidase. | Hypothetical protein. | 0.988 |
OJG17595.1 | OJG18167.1 | RU97_GL002603 | RU97_GL002240 | beta-N-acetylhexosaminidase. | Beta-glucosidase. | 0.766 |
OJG17595.1 | OJG18367.1 | RU97_GL002603 | RU97_GL001764 | beta-N-acetylhexosaminidase. | Glycosyl hydrolase family 3 N terminal domain protein. | 0.513 |
OJG17595.1 | OJG18981.1 | RU97_GL002603 | RU97_GL001599 | beta-N-acetylhexosaminidase. | Hypothetical protein. | 0.770 |
OJG17595.1 | OJG20006.1 | RU97_GL002603 | RU97_GL000239 | beta-N-acetylhexosaminidase. | Hypothetical protein; Belongs to the glycosyl hydrolase 3 family. | 0.772 |
OJG17595.1 | murQ | RU97_GL002603 | RU97_GL002600 | beta-N-acetylhexosaminidase. | N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.638 |
OJG17596.1 | OJG17593.1 | RU97_GL002604 | RU97_GL002601 | Hypothetical protein. | PTS system lactose/cellobiose-specific transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.690 |
OJG17596.1 | OJG17594.1 | RU97_GL002604 | RU97_GL002602 | Hypothetical protein. | Membrane protein. | 0.755 |
OJG17596.1 | OJG17595.1 | RU97_GL002604 | RU97_GL002603 | Hypothetical protein. | beta-N-acetylhexosaminidase. | 0.988 |
OJG17596.1 | OJG18167.1 | RU97_GL002604 | RU97_GL002240 | Hypothetical protein. | Beta-glucosidase. | 0.558 |
page 1 of 3