STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KCP8_CRYNJERCC4 domain-containing protein. (1114 aa)    
Predicted Functional Partners:
Q5KFN9_CRYNJ
Mating-type switching protein swi10, putative.
   
 0.999
Q5KE85_CRYNJ
Hydrophilic protein, putative.
    
 0.989
Q5KH38_CRYNJ
Asparagine-tRNA ligase, putative.
   
 0.962
Q5KIJ9_CRYNJ
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.949
Q5KNM9_CRYNJ
General RNA polymerase II transcription factor, putative.
  
 0.939
Q5KLH0_CRYNJ
3'-5' exonuclease domain-containing protein.
   
 0.938
Q5KMR2_CRYNJ
DNA strand annealing, putative.
   
 0.917
Q5KLT6_CRYNJ
Endonuclease, putative.
    
 0.916
Q5KN74_CRYNJ
DNA mismatch repair protein MSH2, putative; Component of the post-replicative DNA mismatch repair system (MMR).
   
 0.889
Q5KPE3_CRYNJ
Single-stranded DNA specific endodeoxyribonuclease, putative.
   
 0.883
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.