STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KFJ4_CRYNJTranslation release factor, putative. (757 aa)    
Predicted Functional Partners:
Q5KJR9_CRYNJ
Translation release factor, putative.
   
 0.999
PAB1
Polyadenylate-binding protein, cytoplasmic and nuclear; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and [...]
   
 0.938
Q5KGJ6_CRYNJ
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
 
   0.905
Q5KN88_CRYNJ
Uncharacterized protein.
   
 
 0.846
Q5KPZ1_CRYNJ
Ribosomal protein S3, putative; Belongs to the universal ribosomal protein uS3 family.
   
 0.832
Q5KQ02_CRYNJ
mRNA export factor elf1, putative.
   
 
 0.825
Q5K8R4_CRYNJ
DNA helicase, putative.
    
 0.791
Q5KKH8_CRYNJ
ATP dependent helicase, putative.
    
 0.791
Q5KMB1_CRYNJ
RRM domain-containing protein.
   
 0.759
Q5KCJ8_CRYNJ
Cytoplasm protein, putative.
   
 
 0.757
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.