STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KFJ7_CRYNJUncharacterized protein. (1123 aa)    
Predicted Functional Partners:
A0A0S2M5M4
Smg4_UPF3 domain-containing protein.
   
 0.999
Q5KJM2_CRYNJ
RNA binding protein, putative.
    
 0.998
Q5KKH8_CRYNJ
ATP dependent helicase, putative.
   
 0.997
Q5KJW8_CRYNJ
RNA binding protein, putative.
    
 0.995
Q5KMY4_CRYNJ
PWI domain-containing protein.
    
 
 0.965
Q5K8R4_CRYNJ
DNA helicase, putative.
   
 0.947
Q5KIZ3_CRYNJ
Uncharacterized protein.
     
 0.923
Q5KLP3_CRYNJ
Poly(A) binding protein, putative.
    
 0.860
FAL1
ATP-dependent RNA helicase FAL1; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity). Belongs to the DEAD box helicase family. DDX48/FAL1 subfamily.
    
 0.855
A0A0S2LI56
PINc domain-containing protein.
   
 0.730
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.