STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KFM4_CRYNJrRNA primary transcript binding protein, putative. (651 aa)    
Predicted Functional Partners:
Q5KBT6_CRYNJ
Splicing factor, putative.
   
 0.999
Q5KBW5_CRYNJ
Small nuclear ribonucleoprotein, putative.
 
 
 0.998
BBP
Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family.
   
 
 0.996
Q5K8T0_CRYNJ
Uncharacterized protein.
   
 
 0.993
Q5KA20_CRYNJ
Small nuclear ribonucleoprotein G.
   
 0.988
Q5KFU9_CRYNJ
Uncharacterized protein.
   
 
 0.987
Q5KM44_CRYNJ
Small nuclear ribonucleoprotein Sm D2.
   
 0.987
CEF1
Pre-mRNA-splicing factor CEF1; Involved in pre-mRNA splicing and cell cycle control.
   
 0.986
RSE1
Pre-mRNA-splicing factor RSE1; Involved in pre-mRNA splicing and cell cycle control.
   
 0.986
Q5KBD5_CRYNJ
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.986
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.