STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KK68_CRYNJUrea transport-related protein, putative. (626 aa)    
Predicted Functional Partners:
IML1
Vacuolar membrane-associated protein IML1.
    
 0.999
Q5KFU1_CRYNJ
Expressed protein.
    
 0.999
Q5KIX0_CRYNJ
Vacuolar membrane protein, putative.
    
 0.998
Q5KMW4_CRYNJ
Nuclear pore protein seh1, putative; Belongs to the WD repeat SEC13 family.
   
 0.998
Q5K9X2_CRYNJ
Cytoplasm protein, putative.
   
 0.997
Q5KN41_CRYNJ
Uncharacterized protein.
   
 0.979
Q5KBR1_CRYNJ
Uncharacterized protein.
    
 0.971
Q5KJZ1_CRYNJ
Mitochondrial inner membrane protease subunit.
   
 0.950
SEC13
Protein transport protein SEC13; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport facto [...]
   
 0.942
Q5KPD5_CRYNJ
Expressed protein.
    
 0.940
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.