STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KM35_CRYNJUbiquitin-protein ligase, putative. (108 aa)    
Predicted Functional Partners:
Q5KNF0_CRYNJ
Ubiquitin-protein ligase, putative.
    
 0.998
Q5KDH7_CRYNJ
CPSF_A domain-containing protein.
   
 0.997
Q5KPL1_CRYNJ
Transcriptional elongation regulator, putative; Belongs to the SKP1 family.
   
 0.996
Q5KN16_CRYNJ
Ubiquitin-protein ligase, putative; Belongs to the SKP1 family.
   
 0.995
Q5K745_CRYNJ
Ubiquitin-protein ligase, putative; Belongs to the cullin family.
    
 0.992
Q5KK31_CRYNJ
Ribosomal chaperone, putative.
   
 0.989
Q5KD56_CRYNJ
Ubiquitin-protein ligase, putative.
    
 0.988
JHD1
JmjC domain-containing histone demethylation protein 1; Histone demethylase that specifically demethylates 'Lys-36' of histone H3, thereby playing a central role in histone code.
    
 0.983
Q5KAP0_CRYNJ
E2 ubiquitin-conjugating enzyme, putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.978
Q5KDE6_CRYNJ
Ubiquitin-protein ligase, putative; Belongs to the cullin family.
    
 0.978
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.