STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5KMF6_CRYNJValine-tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family. (1109 aa)    
Predicted Functional Partners:
Q5KP63_CRYNJ
Elongation factor 1-gamma (Ef-1-gamma), putative.
   
 
 0.996
Q5K7U0_CRYNJ
Leucine-tRNA ligase, putative.
   
 
 0.927
Q5K9D3_CRYNJ
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.926
Q5KIF8_CRYNJ
Brix domain-containing protein.
 
 
  
 0.907
Q5KPM2_CRYNJ
Isoleucine-tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.890
Q5K6Z8_CRYNJ
Isoleucyl-tRNA synthetase, mitochondrial, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.882
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.839
Q5KH56_CRYNJ
rRNA processing-related protein, putative.
  
  
 0.835
Q5K9E9_CRYNJ
GMP synthase (Glutamine-hydrolyzing), putative.
  
  
 0.834
Q5KE92_CRYNJ
Arginine-tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.821
Your Current Organism:
Cryptococcus neoformans
NCBI taxonomy Id: 214684
Other names: C. neoformans var. neoformans JEC21, Cryptococcus neoformans JEC21, Cryptococcus neoformans var. neoformans JEC21, Cryptococcus neoformans var. neoformans serotype D JEC21, Cryptococcus neoformans var. neoformans strain JEC21, Filobasidiella neoformans var. neoformans strain JEC21
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