Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEF1 | DED1 | P0CO94 | P0CQ74 | Pre-mRNA-splicing factor CEF1; Involved in pre-mRNA splicing and cell cycle control. | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | 0.955 |
| CEF1 | Q5KIQ1_CRYNJ | P0CO94 | Q5KIQ1 | Pre-mRNA-splicing factor CEF1; Involved in pre-mRNA splicing and cell cycle control. | 116 kDa u5 small nuclear ribonucleoprotein component, putative. | 0.995 |
| CEF1 | Q5KQ25_CRYNJ | P0CO94 | Q5KQ25 | Pre-mRNA-splicing factor CEF1; Involved in pre-mRNA splicing and cell cycle control. | Pre-mRNA splicing factor prp1, putative. | 0.469 |
| DED1 | CEF1 | P0CQ74 | P0CO94 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | Pre-mRNA-splicing factor CEF1; Involved in pre-mRNA splicing and cell cycle control. | 0.955 |
| DED1 | DHH1 | P0CQ74 | P0CQ80 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | ATP-dependent RNA helicase DHH1; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA-damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity); Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | 0.811 |
| DED1 | Q5KFB9_CRYNJ | P0CQ74 | Q5KFB9 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.882 |
| DED1 | Q5KFU0_CRYNJ | P0CQ74 | Q5KFU0 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.901 |
| DED1 | Q5KHA1_CRYNJ | P0CQ74 | Q5KHA1 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | ATP synthase subunit gamma. | 0.894 |
| DED1 | Q5KIE2_CRYNJ | P0CQ74 | Q5KIE2 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | Uncharacterized protein. | 0.819 |
| DED1 | Q5KIQ1_CRYNJ | P0CQ74 | Q5KIQ1 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | 116 kDa u5 small nuclear ribonucleoprotein component, putative. | 0.965 |
| DED1 | Q5KKF3_CRYNJ | P0CQ74 | Q5KKF3 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | Cap binding protein, putative; Belongs to the eukaryotic initiation factor 4E family. | 0.893 |
| DED1 | Q5KLP2_CRYNJ | P0CQ74 | Q5KLP2 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] | 0.799 |
| DED1 | Q5KQ25_CRYNJ | P0CQ74 | Q5KQ25 | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | Pre-mRNA splicing factor prp1, putative. | 0.964 |
| DHH1 | DED1 | P0CQ80 | P0CQ74 | ATP-dependent RNA helicase DHH1; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA-damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity); Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | 0.811 |
| DHH1 | Q5KKF3_CRYNJ | P0CQ80 | Q5KKF3 | ATP-dependent RNA helicase DHH1; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA-damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity); Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | Cap binding protein, putative; Belongs to the eukaryotic initiation factor 4E family. | 0.767 |
| DHH1 | Q5KQ25_CRYNJ | P0CQ80 | Q5KQ25 | ATP-dependent RNA helicase DHH1; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA-damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity); Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. | Pre-mRNA splicing factor prp1, putative. | 0.433 |
| Q5KFB9_CRYNJ | DED1 | Q5KFB9 | P0CQ74 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP-dependent RNA helicase ded1; ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Belongs to the DEAD box helicase family. DDX3/DED1 subfamily. | 0.882 |
| Q5KFB9_CRYNJ | Q5KFU0_CRYNJ | Q5KFB9 | Q5KFU0 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| Q5KFB9_CRYNJ | Q5KHA1_CRYNJ | Q5KFB9 | Q5KHA1 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | ATP synthase subunit gamma. | 0.999 |
| Q5KFB9_CRYNJ | Q5KIE2_CRYNJ | Q5KFB9 | Q5KIE2 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Uncharacterized protein. | 0.999 |
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