STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0REH6_MUSAMVQ domain-containing protein. (141 aa)    
Predicted Functional Partners:
M0TC66_MUSAM
Uncharacterized protein.
   
 
 0.713
M0TRG4_MUSAM
VQ domain-containing protein.
      
 0.642
M0UC04_MUSAM
VQ domain-containing protein.
      
 0.586
M0RI65_MUSAM
VQ domain-containing protein.
   
  
 0.542
M0T6Y9_MUSAM
VQ domain-containing protein.
   
  
 0.542
M0SIG2_MUSAM
MHD domain-containing protein.
  
     0.535
M0RL53_MUSAM
Uncharacterized protein.
  
    0.525
M0SG51_MUSAM
VQ domain-containing protein.
      
 0.525
M0RSI1_MUSAM
Uncharacterized protein.
  
     0.519
M0RSN2_MUSAM
Uncharacterized protein.
  
     0.514
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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