STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RFA8_MUSAMGuanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. (444 aa)    
Predicted Functional Partners:
M0RN45_MUSAM
Uncharacterized protein.
   
 0.772
M0RVW9_MUSAM
Uncharacterized protein.
   
 0.772
M0SA61_MUSAM
Uncharacterized protein.
   
 0.772
M0SXZ7_MUSAM
Uncharacterized protein.
   
 0.772
M0T5T9_MUSAM
Uncharacterized protein.
   
 0.772
M0U6D9_MUSAM
Uncharacterized protein.
   
 0.772
M0TYQ2_MUSAM
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
 0.747
M0U602_MUSAM
Uncharacterized protein.
    
 0.735
M0SGB4_MUSAM
Uncharacterized protein.
    
 0.730
M0SGB5_MUSAM
Uncharacterized protein.
    
 0.730
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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