STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RFB2_MUSAMPHD domain-containing protein. (56 aa)    
Predicted Functional Partners:
M0TNQ7_MUSAM
B30.2/SPRY domain-containing protein.
   
 
 0.730
M0SJ35_MUSAM
WD_REPEATS_REGION domain-containing protein.
    
 
 0.719
M0SGP6_MUSAM
Plus3 domain-containing protein.
    
 
 0.648
M0T1R3_MUSAM
Plus3 domain-containing protein.
    
 
 0.648
M0S214_MUSAM
Uncharacterized protein.
    
 
 0.594
M0UAP4_MUSAM
Uncharacterized protein.
    
 
 0.594
M0SMZ7_MUSAM
WD_REPEATS_REGION domain-containing protein.
    
 
 0.558
M0SVH8_MUSAM
WD_REPEATS_REGION domain-containing protein.
    
 
 0.558
M0TR39_MUSAM
Uncharacterized protein; Belongs to the actin family.
    
 
 0.455
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.