STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RGE3_MUSAMtRNA (guanine(26)-N(2))-dimethyltransferase. (555 aa)    
Predicted Functional Partners:
M0RVN5_MUSAM
WD_REPEATS_REGION domain-containing protein.
   
    0.855
M0RU86_MUSAM
Brix domain-containing protein.
   
  
 0.788
M0T050_MUSAM
Brix domain-containing protein.
   
  
 0.788
M0U5S3_MUSAM
WD_REPEATS_REGION domain-containing protein.
   
    0.778
M0T7K3_MUSAM
WD_REPEATS_REGION domain-containing protein.
   
    0.762
M0RNB2_MUSAM
Uncharacterized protein.
   
  
 0.760
M0TBQ7_MUSAM
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
    0.760
M0TQ00_MUSAM
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
   0.745
M0SQT4_MUSAM
TRUD domain-containing protein.
  
 
 0.726
M0S260_MUSAM
Uncharacterized protein.
   
    0.725
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.