STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RH78_MUSAMZF-HD dimerization-type domain-containing protein. (242 aa)    
Predicted Functional Partners:
M0SWW9_MUSAM
X8 domain-containing protein.
  
    0.521
M0SUB2_MUSAM
Uncharacterized protein.
  
     0.520
M0UD81_MUSAM
Uncharacterized protein.
  
     0.515
M0TL01_MUSAM
X8 domain-containing protein.
  
     0.488
M0TUC0_MUSAM
X8 domain-containing protein.
  
     0.482
M0U222_MUSAM
GRAM domain-containing protein.
  
     0.479
M0RT17_MUSAM
TCP domain-containing protein.
  
     0.472
M0SRY0_MUSAM
LOB domain-containing protein.
  
     0.471
M0S4X2_MUSAM
GRAM domain-containing protein.
  
     0.468
M0S6V8_MUSAM
GRAM domain-containing protein.
  
     0.468
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.