STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RIR2_MUSAMUncharacterized protein. (643 aa)    
Predicted Functional Partners:
M0RED6_MUSAM
Zinc_ribbon_12 domain-containing protein.
  
 
  0.571
M0RI77_MUSAM
Zinc_ribbon_12 domain-containing protein.
  
 
  0.568
M0RKB5_MUSAM
Zinc_ribbon_12 domain-containing protein.
  
 
  0.568
M0THF2_MUSAM
Zinc_ribbon_12 domain-containing protein.
  
 
  0.565
M0RF28_MUSAM
Uncharacterized protein.
  
     0.535
M0TLW3_MUSAM
Uncharacterized protein.
  
     0.535
M0TJ64_MUSAM
Uncharacterized protein.
  
     0.532
M0SK79_MUSAM
Uncharacterized protein.
  
     0.531
M0SVJ5_MUSAM
Uncharacterized protein.
  
     0.530
M0T7X9_MUSAM
CSTF_C domain-containing protein.
  
     0.530
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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