STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RKH3_MUSAMRRM domain-containing protein. (357 aa)    
Predicted Functional Partners:
M0SG80_MUSAM
Uncharacterized protein.
    
 
 0.652
M0RXH4_MUSAM
Uncharacterized protein.
   
 
 0.579
M0RM91_MUSAM
RRM domain-containing protein.
   
 
 0.556
M0SA51_MUSAM
Uncharacterized protein.
   
 
 0.556
M0SGK0_MUSAM
SAP domain-containing protein.
   
 
 0.556
M0TDM2_MUSAM
Uncharacterized protein.
   
 
 0.556
M0TFP9_MUSAM
RRM domain-containing protein.
   
 
 0.556
M0REW5_MUSAM
SF3b1 domain-containing protein.
   
  
 0.548
M0S9A0_MUSAM
RRM domain-containing protein.
  
 
   0.533
M0T1U2_MUSAM
RRM domain-containing protein.
  
 
   0.532
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.