STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RLD3_MUSAMBHLH domain-containing protein. (242 aa)    
Predicted Functional Partners:
M0THN7_MUSAM
AT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).
  
     0.519
M0RWL5_MUSAM
PPC domain-containing protein.
  
     0.503
M0T496_MUSAM
AT-hook motif nuclear-localized protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).
  
     0.499
M0STB2_MUSAM
PPC domain-containing protein.
  
     0.498
M0SGQ6_MUSAM
PB1 domain-containing protein.
  
     0.493
M0RVB1_MUSAM
BZIP domain-containing protein.
  
     0.484
M0S801_MUSAM
LOB domain-containing protein.
  
     0.480
M0S202_MUSAM
Uncharacterized protein.
  
   
 0.472
M0RSK7_MUSAM
HMA domain-containing protein.
  
     0.471
M0U669_MUSAM
Uncharacterized protein.
  
     0.461
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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