M0RNB8_MUSAM protein (Musa acuminata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M0RNB8_MUSAM

Ribosomal_L14e domain-containing protein. (170 aa)

Predicted Functional Partners:

M0RU71_MUSAM

0.972

M0T068_MUSAM

0.972

M0S3X9_MUSAM

0.971

M0S089_MUSAM

0.969

M0SBK1_MUSAM

0.969

M0SEA6_MUSAM

0.969

M0T3U4_MUSAM

0.969

M0TIW8_MUSAM

0.969

M0TZR5_MUSAM

0.969

M0SIL2_MUSAM

0.968

Your Current Organism:

Musa acuminata

NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0RNB8_MUSAM	M0RU71_MUSAM	M0RNB8	M0RU71	Ribosomal_L14e domain-containing protein.	Ribosomal_L6 domain-containing protein.	0.972
M0RNB8_MUSAM	M0S089_MUSAM	M0RNB8	M0S089	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.969
M0RNB8_MUSAM	M0S3X9_MUSAM	M0RNB8	M0S3X9	Ribosomal_L14e domain-containing protein.	Ribosomal_L6 domain-containing protein.	0.971
M0RNB8_MUSAM	M0SBK1_MUSAM	M0RNB8	M0SBK1	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.969
M0RNB8_MUSAM	M0SEA6_MUSAM	M0RNB8	M0SEA6	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.969
M0RNB8_MUSAM	M0SIL2_MUSAM	M0RNB8	M0SIL2	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.968
M0RNB8_MUSAM	M0T068_MUSAM	M0RNB8	M0T068	Ribosomal_L14e domain-containing protein.	Ribosomal_L6 domain-containing protein.	0.972
M0RNB8_MUSAM	M0T3U4_MUSAM	M0RNB8	M0T3U4	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.969
M0RNB8_MUSAM	M0TIW8_MUSAM	M0RNB8	M0TIW8	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.969
M0RNB8_MUSAM	M0TZR5_MUSAM	M0RNB8	M0TZR5	Ribosomal_L14e domain-containing protein.	Uncharacterized protein.	0.969
M0RU71_MUSAM	M0RNB8_MUSAM	M0RU71	M0RNB8	Ribosomal_L6 domain-containing protein.	Ribosomal_L14e domain-containing protein.	0.972
M0RU71_MUSAM	M0S089_MUSAM	M0RU71	M0S089	Ribosomal_L6 domain-containing protein.	Uncharacterized protein.	0.988
M0RU71_MUSAM	M0S3X9_MUSAM	M0RU71	M0S3X9	Ribosomal_L6 domain-containing protein.	Ribosomal_L6 domain-containing protein.	0.901
M0RU71_MUSAM	M0SBK1_MUSAM	M0RU71	M0SBK1	Ribosomal_L6 domain-containing protein.	Uncharacterized protein.	0.988
M0RU71_MUSAM	M0SEA6_MUSAM	M0RU71	M0SEA6	Ribosomal_L6 domain-containing protein.	Uncharacterized protein.	0.988
M0RU71_MUSAM	M0SIL2_MUSAM	M0RU71	M0SIL2	Ribosomal_L6 domain-containing protein.	Uncharacterized protein.	0.990
M0RU71_MUSAM	M0T068_MUSAM	M0RU71	M0T068	Ribosomal_L6 domain-containing protein.	Ribosomal_L6 domain-containing protein.	0.900
M0RU71_MUSAM	M0T3U4_MUSAM	M0RU71	M0T3U4	Ribosomal_L6 domain-containing protein.	Uncharacterized protein.	0.988
M0RU71_MUSAM	M0TIW8_MUSAM	M0RU71	M0TIW8	Ribosomal_L6 domain-containing protein.	Uncharacterized protein.	0.988
M0RU71_MUSAM	M0TZR5_MUSAM	M0RU71	M0TZR5	Ribosomal_L6 domain-containing protein.	Uncharacterized protein.	0.988

page 1 of 6

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About