STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RPV8_MUSAMUncharacterized protein. (164 aa)    
Predicted Functional Partners:
M0S2V0_MUSAM
IGR domain-containing protein.
  
     0.497
M0RJ19_MUSAM
PORR domain-containing protein.
  
     0.494
M0T8X1_MUSAM
Uncharacterized protein.
  
     0.473
M0S0X7_MUSAM
Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
     0.460
M0SB97_MUSAM
Uncharacterized protein.
  
     0.459
M0S9A1_MUSAM
Uncharacterized protein.
  
     0.449
M0RQ67_MUSAM
Uncharacterized protein.
  
     0.447
M0TAY9_MUSAM
Uncharacterized protein.
  
     0.447
M0TDV8_MUSAM
Uncharacterized protein.
  
     0.447
M0TYE0_MUSAM
Uncharacterized protein.
  
     0.444
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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