STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RQB1_MUSAMFAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. (507 aa)    
Predicted Functional Partners:
M0SMA3_MUSAM
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.649
M0T7K3_MUSAM
WD_REPEATS_REGION domain-containing protein.
    
  0.642
M0T597_MUSAM
Sas10 domain-containing protein.
    
  0.636
M0U0U5_MUSAM
Uncharacterized protein.
    
  0.617
M0U5S3_MUSAM
WD_REPEATS_REGION domain-containing protein.
    
 0.609
M0S7C7_MUSAM
WD_REPEATS_REGION domain-containing protein.
   
  0.597
M0TJL2_MUSAM
WD_REPEATS_REGION domain-containing protein.
   
 0.592
M0SX70_MUSAM
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
  0.590
M0STP2_MUSAM
Uncharacterized protein.
  
 0.585
M0SV48_MUSAM
Uncharacterized protein.
  
 0.585
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.