STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RQW4_MUSAMRING-type domain-containing protein. (404 aa)    
Predicted Functional Partners:
M0RHS1_MUSAM
Uncharacterized protein.
  
     0.435
M0T4W7_MUSAM
Uncharacterized protein.
  
     0.430
M0RMN9_MUSAM
Lzipper-MIP1 domain-containing protein.
  
     0.427
M0STS1_MUSAM
Uncharacterized protein.
  
     0.425
M0U7G7_MUSAM
Uncharacterized protein.
  
     0.424
M0RTG5_MUSAM
Uncharacterized protein.
  
     0.420
M0S9W0_MUSAM
Uncharacterized protein.
  
     0.418
M0RIX4_MUSAM
Uncharacterized protein.
  
     0.415
M0S3R8_MUSAM
BHLH domain-containing protein.
  
     0.415
M0RMD2_MUSAM
Uncharacterized protein.
  
     0.413
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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