STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RR23_MUSAMCID domain-containing protein. (530 aa)    
Predicted Functional Partners:
M0S643_MUSAM
RTR1-type domain-containing protein.
   
 0.805
M0U407_MUSAM
RAI1 domain-containing protein.
    
 
 0.798
M0S0U7_MUSAM
RPOL4c domain-containing protein.
    
  0.729
M0TT97_MUSAM
RPOL4c domain-containing protein.
    
  0.681
M0RWF5_MUSAM
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
    
 
 0.655
M0SQU5_MUSAM
XRN_M domain-containing protein.
    
 
 0.655
M0SQU6_MUSAM
XRN_M domain-containing protein.
    
 
 0.655
M0SQU7_MUSAM
CCHC-type domain-containing protein.
    
 
 0.655
M0TND5_MUSAM
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
    
 
 0.655
M0SFN6_MUSAM
Uncharacterized protein.
    
  0.650
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.