M0RRZ7_MUSAM protein (Musa acuminata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M0RRZ7_MUSAM

Uncharacterized protein. (335 aa)

Predicted Functional Partners:

M0SKQ6_MUSAM

0.830

M0SMV9_MUSAM

0.830

M0TYV5_MUSAM

0.830

M0REW5_MUSAM

0.712

M0RK56_MUSAM

0.448

M0S4H6_MUSAM

0.448

M0T8N0_MUSAM

0.448

M0T8N1_MUSAM

0.448

M0U1T7_MUSAM

0.442

M0RX71_MUSAM

0.436

Your Current Organism:

Musa acuminata

NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0REW5_MUSAM	M0RRZ7_MUSAM	M0REW5	M0RRZ7	SF3b1 domain-containing protein.	Uncharacterized protein.	0.712
M0REW5_MUSAM	M0S4H6_MUSAM	M0REW5	M0S4H6	SF3b1 domain-containing protein.	SF3A2 domain-containing protein.	0.972
M0REW5_MUSAM	M0T8N0_MUSAM	M0REW5	M0T8N0	SF3b1 domain-containing protein.	Matrin-type domain-containing protein.	0.972
M0REW5_MUSAM	M0T8N1_MUSAM	M0REW5	M0T8N1	SF3b1 domain-containing protein.	SF3A2 domain-containing protein.	0.972
M0RK56_MUSAM	M0RRZ7_MUSAM	M0RK56	M0RRZ7	Uncharacterized protein.	Uncharacterized protein.	0.448
M0RK56_MUSAM	M0RX71_MUSAM	M0RK56	M0RX71	Uncharacterized protein.	Jacalin-type lectin domain-containing protein.	0.453
M0RK56_MUSAM	M0U1T7_MUSAM	M0RK56	M0U1T7	Uncharacterized protein.	CRM domain-containing protein.	0.494
M0RRZ7_MUSAM	M0REW5_MUSAM	M0RRZ7	M0REW5	Uncharacterized protein.	SF3b1 domain-containing protein.	0.712
M0RRZ7_MUSAM	M0RK56_MUSAM	M0RRZ7	M0RK56	Uncharacterized protein.	Uncharacterized protein.	0.448
M0RRZ7_MUSAM	M0RX71_MUSAM	M0RRZ7	M0RX71	Uncharacterized protein.	Jacalin-type lectin domain-containing protein.	0.436
M0RRZ7_MUSAM	M0S4H6_MUSAM	M0RRZ7	M0S4H6	Uncharacterized protein.	SF3A2 domain-containing protein.	0.448
M0RRZ7_MUSAM	M0SKQ6_MUSAM	M0RRZ7	M0SKQ6	Uncharacterized protein.	Uncharacterized protein.	0.830
M0RRZ7_MUSAM	M0SMV9_MUSAM	M0RRZ7	M0SMV9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.830
M0RRZ7_MUSAM	M0T8N0_MUSAM	M0RRZ7	M0T8N0	Uncharacterized protein.	Matrin-type domain-containing protein.	0.448
M0RRZ7_MUSAM	M0T8N1_MUSAM	M0RRZ7	M0T8N1	Uncharacterized protein.	SF3A2 domain-containing protein.	0.448
M0RRZ7_MUSAM	M0TYV5_MUSAM	M0RRZ7	M0TYV5	Uncharacterized protein.	Uncharacterized protein.	0.830
M0RRZ7_MUSAM	M0U1T7_MUSAM	M0RRZ7	M0U1T7	Uncharacterized protein.	CRM domain-containing protein.	0.442
M0RX71_MUSAM	M0RK56_MUSAM	M0RX71	M0RK56	Jacalin-type lectin domain-containing protein.	Uncharacterized protein.	0.453
M0RX71_MUSAM	M0RRZ7_MUSAM	M0RX71	M0RRZ7	Jacalin-type lectin domain-containing protein.	Uncharacterized protein.	0.436
M0RX71_MUSAM	M0U1T7_MUSAM	M0RX71	M0U1T7	Jacalin-type lectin domain-containing protein.	CRM domain-containing protein.	0.420

page 1 of 2

Server load: low (20%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About