STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RTS2_MUSAMUncharacterized protein. (235 aa)    
Predicted Functional Partners:
M0SP73_MUSAM
Uncharacterized protein.
  
     0.471
M0TZK5_MUSAM
LEA_2 domain-containing protein.
  
     0.458
M0S875_MUSAM
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.441
M0S317_MUSAM
Uncharacterized protein.
  
     0.440
M0TB78_MUSAM
LEA_2 domain-containing protein.
  
     0.440
M0SVS1_MUSAM
Uncharacterized protein.
  
     0.438
M0RUU8_MUSAM
Uncharacterized protein.
  
     0.435
M0T7H6_MUSAM
Uncharacterized protein.
  
     0.432
M0T8A4_MUSAM
C2H2-type domain-containing protein.
  
     0.432
M0THB2_MUSAM
BHLH domain-containing protein.
  
     0.431
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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