M0RU57_MUSAM protein (Musa acuminata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M0RU57_MUSAM

BHLH domain-containing protein. (552 aa)

Predicted Functional Partners:

M0ST28_MUSAM

0.596

M0SXA3_MUSAM

0.527

M0U240_MUSAM

0.513

M0S4R5_MUSAM

0.497

M0UAN2_MUSAM

0.494

M0RG72_MUSAM

0.489

M0U239_MUSAM

0.488

M0TRZ1_MUSAM

0.487

M0RLX2_MUSAM

0.472

M0SX25_MUSAM

0.472

Your Current Organism:

Musa acuminata

NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0RG72_MUSAM	M0RLX2_MUSAM	M0RG72	M0RLX2	Uncharacterized protein.	Uncharacterized protein.	0.463
M0RG72_MUSAM	M0RU57_MUSAM	M0RG72	M0RU57	Uncharacterized protein.	BHLH domain-containing protein.	0.489
M0RLX2_MUSAM	M0RG72_MUSAM	M0RLX2	M0RG72	Uncharacterized protein.	Uncharacterized protein.	0.463
M0RLX2_MUSAM	M0RU57_MUSAM	M0RLX2	M0RU57	Uncharacterized protein.	BHLH domain-containing protein.	0.472
M0RLX2_MUSAM	M0S4R5_MUSAM	M0RLX2	M0S4R5	Uncharacterized protein.	Uncharacterized protein.	0.464
M0RLX2_MUSAM	M0U239_MUSAM	M0RLX2	M0U239	Uncharacterized protein.	Uncharacterized protein.	0.476
M0RLX2_MUSAM	M0U240_MUSAM	M0RLX2	M0U240	Uncharacterized protein.	Uncharacterized protein.	0.478
M0RU57_MUSAM	M0RG72_MUSAM	M0RU57	M0RG72	BHLH domain-containing protein.	Uncharacterized protein.	0.489
M0RU57_MUSAM	M0RLX2_MUSAM	M0RU57	M0RLX2	BHLH domain-containing protein.	Uncharacterized protein.	0.472
M0RU57_MUSAM	M0S4R5_MUSAM	M0RU57	M0S4R5	BHLH domain-containing protein.	Uncharacterized protein.	0.497
M0RU57_MUSAM	M0ST28_MUSAM	M0RU57	M0ST28	BHLH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.596
M0RU57_MUSAM	M0SX25_MUSAM	M0RU57	M0SX25	BHLH domain-containing protein.	SANT domain-containing protein.	0.472
M0RU57_MUSAM	M0SXA3_MUSAM	M0RU57	M0SXA3	BHLH domain-containing protein.	Uncharacterized protein.	0.527
M0RU57_MUSAM	M0TRZ1_MUSAM	M0RU57	M0TRZ1	BHLH domain-containing protein.	Myb-like domain-containing protein.	0.487
M0RU57_MUSAM	M0U239_MUSAM	M0RU57	M0U239	BHLH domain-containing protein.	Uncharacterized protein.	0.488
M0RU57_MUSAM	M0U240_MUSAM	M0RU57	M0U240	BHLH domain-containing protein.	Uncharacterized protein.	0.513
M0RU57_MUSAM	M0UAN2_MUSAM	M0RU57	M0UAN2	BHLH domain-containing protein.	Myb-like domain-containing protein.	0.494
M0S4R5_MUSAM	M0RLX2_MUSAM	M0S4R5	M0RLX2	Uncharacterized protein.	Uncharacterized protein.	0.464
M0S4R5_MUSAM	M0RU57_MUSAM	M0S4R5	M0RU57	Uncharacterized protein.	BHLH domain-containing protein.	0.497
M0ST28_MUSAM	M0RU57_MUSAM	M0ST28	M0RU57	WD_REPEATS_REGION domain-containing protein.	BHLH domain-containing protein.	0.596

page 1 of 2

Server load: low (20%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Textmining

Neighborhood

Databases

Coexpression

© STRING Consortium 2023

Credits

Access

Info

About