STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RVA2_MUSAMUncharacterized protein. (333 aa)    
Predicted Functional Partners:
M0TAG6_MUSAM
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.553
M0S8V6_MUSAM
Uncharacterized protein.
      
 0.511
M0S9M3_MUSAM
Uncharacterized protein.
      
 0.469
M0TUS0_MUSAM
Uncharacterized protein.
      
 0.469
M0RYP2_MUSAM
Uncharacterized protein.
      
 0.432
M0SLE8_MUSAM
Uncharacterized protein.
      
 0.432
M0U288_MUSAM
Uncharacterized protein.
      
 0.432
M0SXE9_MUSAM
ACT domain-containing protein.
      
 0.414
M0TEY5_MUSAM
APH domain-containing protein.
      
 0.414
M0TEY6_MUSAM
APH domain-containing protein.
      
 0.414
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.