STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0RX93_MUSAMPeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. (155 aa)    
Predicted Functional Partners:
M0RF32_MUSAM
Uncharacterized protein.
  
 
 0.953
M0SRD3_MUSAM
Uncharacterized protein.
   
 
 0.915
M0RLP8_MUSAM
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.911
M0TEI9_MUSAM
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.897
M0REW1_MUSAM
Uncharacterized protein.
  
   0.881
M0SWB2_MUSAM
Uncharacterized protein.
  
 
 0.881
M0TRY5_MUSAM
Uncharacterized protein.
  
 
 0.881
M0TXY1_MUSAM
Uncharacterized protein.
  
 
 0.881
M0U2W6_MUSAM
RIBOSOMAL_L9 domain-containing protein.
  
   0.872
M0RX54_MUSAM
Uncharacterized protein.
   
   0.871
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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