STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0S1A4_MUSAMUncharacterized protein. (429 aa)    
Predicted Functional Partners:
M0U6X3_MUSAM
Uncharacterized protein.
    
 
 0.756
M0U3M9_MUSAM
Uncharacterized protein.
   
 
 0.716
M0SVJ6_MUSAM
Uncharacterized protein.
   
 
 0.714
M0T4V0_MUSAM
Uncharacterized protein.
   
 
 0.660
M0TH39_MUSAM
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
    
   0.649
M0RZP1_MUSAM
Uncharacterized protein.
   
 
 0.630
M0S6F5_MUSAM
Uncharacterized protein.
   
 
 0.630
M0TBS0_MUSAM
Uncharacterized protein.
   
 
 0.613
M0TZ40_MUSAM
Uncharacterized protein.
   
 
 0.613
M0SPM5_MUSAM
Uncharacterized protein.
   
 
 0.596
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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