STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0S1I5_MUSAML-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (350 aa)    
Predicted Functional Partners:
M0T713_MUSAM
Aspartate aminotransferase.
   
 0.960
M0SM28_MUSAM
Aspartate aminotransferase.
   
 0.958
M0TBH2_MUSAM
Aspartate aminotransferase.
   
 0.958
M0TKK3_MUSAM
Aspartate aminotransferase.
   
 0.958
M0RK67_MUSAM
Malic enzyme.
  
 0.947
M0RVS9_MUSAM
Malic enzyme.
  
 0.947
M0TFC3_MUSAM
Malic enzyme.
  
 0.947
M0THA6_MUSAM
Malic enzyme.
  
 0.947
M0UAJ6_MUSAM
Malic enzyme.
  
 0.947
M0SFW4_MUSAM
E1_dh domain-containing protein.
  
 
 0.936
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.