STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0S340_MUSAMUncharacterized protein. (449 aa)    
Predicted Functional Partners:
M0RYY0_MUSAM
Uncharacterized protein.
  
     0.437
M0REN2_MUSAM
Uncharacterized protein.
  
     0.425
M0S3D6_MUSAM
XS domain-containing protein.
  
     0.421
M0RL89_MUSAM
Uncharacterized protein.
  
     0.410
M0S5K8_MUSAM
Uncharacterized protein.
  
    0.407
M0TFK3_MUSAM
Uncharacterized protein.
  
     0.404
M0S8Y9_MUSAM
Uncharacterized protein.
  
     0.400
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.