STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0S6J0_MUSAMUncharacterized protein. (120 aa)    
Predicted Functional Partners:
M0TDB6_MUSAM
Uncharacterized protein.
  
     0.527
M0TLC2_MUSAM
Uncharacterized protein.
  
     0.523
M0RHS3_MUSAM
Uncharacterized protein.
  
     0.514
M0UBP8_MUSAM
Uncharacterized protein.
  
     0.513
M0UBX1_MUSAM
Uncharacterized protein.
  
     0.507
M0S0W9_MUSAM
NAC domain-containing protein.
  
     0.506
M0TB50_MUSAM
Response regulatory domain-containing protein.
  
     0.505
M0RYU5_MUSAM
NAC domain-containing protein.
  
     0.499
M0T0X6_MUSAM
Uncharacterized protein.
  
     0.498
M0TWB1_MUSAM
Uncharacterized protein.
  
     0.497
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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