STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0S6R4_MUSAMTF-B3 domain-containing protein. (304 aa)    
Predicted Functional Partners:
M0SHM3_MUSAM
Zinc_ribbon_12 domain-containing protein.
  
     0.532
M0TZS6_MUSAM
Uncharacterized protein.
  
     0.531
M0U1S1_MUSAM
C2H2-type domain-containing protein.
  
     0.530
M0RJ44_MUSAM
C2H2-type domain-containing protein.
  
     0.528
M0T9P2_MUSAM
Uncharacterized protein.
  
     0.524
M0U435_MUSAM
BHLH domain-containing protein.
  
     0.524
M0TK57_MUSAM
LOB domain-containing protein.
  
   
 0.523
M0THN8_MUSAM
Uncharacterized protein.
  
     0.521
M0U7V3_MUSAM
Uncharacterized protein.
  
     0.521
M0SDM8_MUSAM
BHLH domain-containing protein.
  
     0.518
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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