STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0S8S8_MUSAMDimer_Tnp_hAT domain-containing protein. (199 aa)    
Predicted Functional Partners:
M0S8S7_MUSAM
BED-type domain-containing protein.
 
     0.524
M0SFA9_MUSAM
Dimer_Tnp_hAT domain-containing protein.
  
     0.480
M0SF85_MUSAM
BED-type domain-containing protein.
  
     0.451
M0TUL5_MUSAM
BED-type domain-containing protein.
  
     0.449
M0RIQ1_MUSAM
BED-type domain-containing protein.
  
     0.442
M0SDU1_MUSAM
Uncharacterized protein.
  
     0.431
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.