STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SE22_MUSAMUncharacterized protein. (304 aa)    
Predicted Functional Partners:
M0RLC6_MUSAM
Uncharacterized protein.
  
   
 0.564
M0SBH2_MUSAM
TCP domain-containing protein.
  
 
 
 0.542
M0SW95_MUSAM
TCP domain-containing protein.
  
 
 
 0.535
M0RI60_MUSAM
TCP domain-containing protein.
  
 
 
 0.521
M0REC9_MUSAM
TCP domain-containing protein.
  
     0.516
M0S9U6_MUSAM
Uncharacterized protein.
  
     0.513
M0SDZ9_MUSAM
TCP domain-containing protein.
  
 
   0.512
M0SSI4_MUSAM
TCP domain-containing protein.
  
 
   0.505
M0TQ65_MUSAM
PB1 domain-containing protein.
  
   
 0.499
M0U1W8_MUSAM
NAC domain-containing protein.
  
     0.499
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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