STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SEX5_MUSAMUncharacterized protein. (290 aa)    
Predicted Functional Partners:
M0SCX6_MUSAM
Uncharacterized protein.
     
 0.957
M0RYL2_MUSAM
Nicotinamide-nucleotide adenylyltransferase.
     
 0.948
M0S5G6_MUSAM
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
     
 0.948
M0RLT1_MUSAM
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
     
 0.938
M0UAR4_MUSAM
Uncharacterized protein.
  
  
 
0.901
M0TTA0_MUSAM
Deacetylase sirtuin-type domain-containing protein.
     
  0.900
M0S9Q6_MUSAM
Uncharacterized protein.
      
 0.578
M0RKE4_MUSAM
BHLH domain-containing protein.
      
 0.465
M0SMJ6_MUSAM
Uncharacterized protein.
      
 0.461
M0SJ48_MUSAM
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
      
 0.454
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.