STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0SFN7_MUSAMDUF4005 domain-containing protein. (429 aa)    
Predicted Functional Partners:
M0SRU4_MUSAM
BHLH domain-containing protein.
  
     0.503
M0TMQ0_MUSAM
Uncharacterized protein.
  
     0.499
M0RP17_MUSAM
BHLH domain-containing protein.
  
     0.490
M0TL84_MUSAM
Uncharacterized protein.
  
     0.482
M0SVT3_MUSAM
Uncharacterized protein.
  
     0.474
M0RWV3_MUSAM
BHLH domain-containing protein.
  
     0.458
M0SXD2_MUSAM
BHLH domain-containing protein.
  
     0.457
M0SFH5_MUSAM
Uncharacterized protein.
  
     0.450
M0RGU3_MUSAM
PINc domain-containing protein.
  
     0.448
M0TE15_MUSAM
Uncharacterized protein.
  
     0.448
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 214687
Other names: M. acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis, Musa acuminata subsp. malaccensis (Ridl.) N.W.Simmonds, Musa acuminata var. malaccensis, Musa acuminata var. malaccensis (Ridl.) Nasution, pisang utan, true apple banana, wild Malaysian banana
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